Publications principales

2018

  • Bitetti A*, Mallory AC*, Carrieri C, Golini E, Carreño Gutierrez H, Perlas E, Pérez-Rico YA, Tocchini-Valentini GP, Enright AJ, Norton WHJ, Mandillo S, O’Carroll D and Shkumatava A (2018) MicroRNA degradation by a conserved target RNA regulates animal behavior. Nat Struct Mol Biol. 25(3):244-251. doi: 10.1038/s41594-018-0032-x.
  • Choux C, Binquet C, Carmignac V, Bruno C, Chapusot C, Barberet J, Lamotte M, Sagot P, Bourc’his D and Fauque P (2018) The epigenetic control of transposable elements and imprinted genes in newborns is affected by the mode of conception: ART versus spontaneous conception without underlying infertility. Hum Reprod. 33(2):331-340. doi: 10.1093/humrep/dex366.
  • Clément C, Orsi GA, Gatto A, Forest A, Hajj H, Miné-Hattab J, Garnier M, Gurard-Levin ZA, Quivy JP and Almouzni G (2018) High-resolution visualization of H3 variants during replication reveals their controlled recycling. Nature Commun. 9(1):3181. doi: 10.1038/s41467-018-05697-1. *Dedicated to Maxime Dahan*
  • Conway E, Jerman E, Healy E, Ito S, Holoch D, Oliviero G, Deevy O, Glancy E, Fitzpatrick DJ, Mucha M, Watson A, Rice AM, Chammas P, Huang C, Pratt-Kelly I, Koseki Y, Nakayama M, Ishikura T, Streubel G, Wynne K, Hokamp K, McLysaght A, Ciferri C, Di Croce L, Cagney G, Margueron R, Koseki H and Bracken AP (2018) A Family of Vertebrate-Specific Polycombs Encoded by the LCOR/LCORL Genes Balance PRC2 Subtype Activities. Mol Cell. 70(3):408-421.e8. doi: 10.1016/j.molcel.2018.03.005.
  • De Muyt A, Pyatnitskaya A, Andréani J, Ranjha L, Ramus C, Laureau R, Fernandez-Vega A, Holoch D, Girard E, Govin J, Margueron R, Couté Y, Cejka P, Guérois R and Borde V (2018) A meiotic XPF-ERCC1-like complex recognizes joint molecule recombination intermediates to promote crossover formation. Genes Dev. 32(3-4):283-296. doi: 10.1101/gad.308510.117.
  • Di Donato V, De Santis F, Albadri S, Auer TO, Duroure K, Charpentier M, Concordet P, Gebhardt C and Del Bene F (2018) An attractive Reelin gradient establishes synaptic lamination in the vertebrate visual system. Neuron 97(5):1049-1062.e6. doi: 10.1016/j.neuron.2018.01.030.
  • Jang SM, Kauzlaric A, Quivy JP, Pontis J, Rauwel B, Coluccio A, Offner S, Duc J, Turelli P, Almouzni G and Trono D (2018) KAP1 facilitates reinstatement of heterochromatin after DNA replication. Nucleic Acids Res. 2018 Jun 28. doi: 10.1093/nar/gky580.
  • Lilja AM, Rodilla V, Huyghe M, Hannezo E, Landragin C, Renaud O, Leroy O, Rulands S, Simons BD and Fre S (2018) Clonal analysis of Notch1-expressing cells reveals the existence of unipotent stem cells that retain long-term plasticity in the embryonic mammary gland. Nature Cell Biol. 20(6):677-687. doi: 10.1038/s41556-018-0108-1.
  • Mendez-Bermudez A, Lototska L, Bauwens S, Giraud-Panis MJ, Croce O, Jamet K, Irizar A, Mowinckel M, Koundrioukoff S, Nottet N, Almouzni G, Teulade-Fichou MP, Schertzer M, Perderiset M, Londoño-Vallejo A, Debatisse M, Gilson E and Ye J (2018) Genome-wide Control of Heterochromatin Replication by the Telomere Capping Protein TRF2. Mol Cell. 70(3):449-461.e5. doi: 10.1016/j.molcel.2018.03.036.
  • Pace L, Goudot C, Zueva E, Gueguen P, Burgdorf N, Waterfall JJ, Quivy JP, Almouzni G and Amigorena S (2018) The epigenetic control of stemness in CD8+ T cell fate commitment. Science 359(6372):177-186. doi: 10.1126/science.aah6499.
  • Pérez-Palacios R and Bourc’his D (2018) A single-cell chromatin map of human embryos. Nat Cell Biol. 20(7):742-744. doi: 10.1038/s41556-018-0134-z.
  • Philip T, Almouzni G, Poortmans P (2018) Vision 2030 for the optimal approach to cancer research and care in Europe: A mission or a network of networks? Tumori 300891618783655. doi: 10.1177/0300891618783655.
  • Rosenberg S, Simeonova I, Bielle F, Verreault M, Bance B, Le Roux I, Daniau M, Nadaradjane A, Gleize V, Paris S, Marie Y, Giry M, Polivka M, Figarella-Branger D, Aubriot-Lorton MH, Villa C, Vasiljevic A, Lechapt-Zalcman E, Kalamarides M, Sharif A, Mokhtari K, Pagnotta SM, Iavarone A, Lasorella A, Huillard E and Sanson M (2018) A recurrent point mutation in PRKCA is a hallmark of chordoid gliomas. Nat Commun. 9(1):2371. doi: 10.1038/s41467-018-04622-w.
  • Shimell M, Pan X, Martin FA, Ghosh AC, Leopold P, O’Connor MB and Romero NM (2018) Prothoracicotropic hormone modulates environmental adaptive plasticity through the control of developmental timing. Development 145(6). pii: dev159699. doi: 10.1242/dev.159699.

2017

  • Albadri S, Del Bene F and Revenu C (2017) Genome editing using CRISPR/Cas9-based knock-in approaches in zebrafish. Methods. 121-122:77-85. doi: 10.1016/j.ymeth.2017.03.005.
  • Batté A, Brocas C, Bordelet H, Hocher A, Ruault M, Adjiri A, Taddei A* and Dubrana K* (2017) Recombination at subtelomeres is regulated by physical distance, double-strand break resection and chromatin status. EMBO J. 36(17):2609-2625. doi: 10.15252/embj.201796631.
  • Borensztein M, Syx L, Ancelin K, Diabangouaya P, Picard C, Liu T, Liang JB, Vassilev I, Galupa R, Servant N, Barillot E, Surani A, Chen CJ and Heard E (2017) Xist-dependent imprinted X inactivation and the early developmental consequences of its failure. Nat Struct Mol Biol. 24(3):226-233. doi: 10.1038/nsmb.3365.
  • Bosveld F, Ainslie A and Bellaïche YJ (2017) Sequential activities of Dynein, Mud and Asp in centrosome-spindle coupling maintain centrosome number upon mitosis. J Cell Sci. 130(20):3557-3567. doi: 10.1242/jcs.201350.
  • da Rocha ST and Heard E (2017) Novel players in X inactivation: insights into Xist-mediated gene silencing and chromosome conformation. Nat Struct Mol Biol. 24(3):197-204. doi: 10.1038/nsmb.3370.
  • Davis MP, Carrieri C, Saini HK, van Dongen S, Leonardi T, Bussotti G, Monahan JM, Auchynnikava T, Bitetti A, Rappsilber J, Allshire RC, Shkumatava A, O’Carroll D and Enright AJ (2017) Transposon-driven transcription is a conserved feature of vertebrate spermatogenesis and transcript evolution. EMBO Rep. 18(7):1231-1247. doi: 10.15252/embr.201744059.
  • Djenoune L, Desban L, Gomez J, Sternberg JR, Prendergast A, Langui D, Quan FB, Marnas H, Auer TO, Rio JP, Del Bene F, Bardet PL and Wyart C (2017) The dual developmental origin of spinal cerebrospinal fluid-contacting neurons gives rise to distinct functional subtypes. Sci Rep. 7(1):719. doi: 10.1038/s41598-017-00350-1.
  • Dekker J and Heard E (2017) Structural and functional diversity of Topologically Associating Domains. FEBS Lett. 589(20 Pt A):2877-84. doi: 10.1016/j.febslet.2015.08.044.
  • Duroc, Y, Kumar, R, Ranjha, L, Adam, C, Guérois, R, Md Muntaz, K, Marsolier-Kergoat, MC, Dingli, F, Laureau, R, Loew, D, Llorente, B, Charbonnier, JB, Cejka, P and Borde V (2017) Concerted action of the MutLβ heterodimer and Mer3 helicase regulates the global extent of meiotic gene conversion. eLife 6, e21900. doi: 10.7554/eLife.21900.
  • Filipescu D, Naughtin M, Podsypanina K, Lejour V, Wilson L, Gurard-Levin Z.A, Orsi G.A, Simeonova I, Toufektchan E, Attardi L.D, Toledo F and Almouzni G (2017) Essential role for centromeric factors following p53 loss and oncogenic transformation. Genes Dev. 31(5):463-480.  doi: 10.1101/gad.290924.116.
  • Gendrel AV, Marion-Poll L, Katoh K and Heard E (2017) Random monoallelic expression of genes on autosomes: Parallels with X-chromosome inactivation. Semin Cell Dev Biol. 56:100-110. doi: 10.1016/j.ceb.2017.06.005.
  • Gervais L and Bardin A (2017) Tissue homeostasis and aging: new insight from the Fly intestine. Curr Opin Cell Biol. 8:97-105. doi: 10.1016/j.ceb.2017.06.005.
  • Giorgetti L and Heard E (2017) Closing the loop: 3C versus DNA FISH. Genome Biol. 17(1):215. doi: 10.1186/s13059-016-1081-2.
  • Greenberg MV*, Glaser J*, Borsos M, El Marjou F, Walter M, Teissandier A and Bourc’his D* (2017) Transient transcription in the early embryo sets an epigenetic state that programs postnatal growth. Nat Genet. 49(1):110-118. doi: 10.1038/ng.3718.
  • Guevorkian K and Maître JL (2017) Micropipette aspiration: A unique tool for exploring cell and tissue mechanics in vivo. Methods Cell Biol. 139:187-201. doi: 10.1016/bs.mcb.2016.11.012.
  • Guirao B and Bellaïche Y (2017) Biomechanics of cell rearrangements in Drosophila. Curr Opin Cell Biol. 48:113-124. doi: 10.1016/j.ceb.2017.06.004.
  • Hocher A, Ruault, Kaferle P, Garnier M, Descrimes M, Morillon A and Taddei A (2017) Expanding heterochromatin reveals discrete subtelomeric domains delimited by chromatin landscape transitions. bioRxiv 187138.
  • Holoch D and Margueron R* (2017) Mechanisms regulating PRC2 recruitment and enzymatic activity. Trends Biochem Sci. 42(7):531-542. doi: 10.1016/j.tibs.2017.04.003.
  • Holoch D and Margueron R (2017) Chromatin biology: Breaking into the PRC2 cage. Nat Chem Biol. 2017 Apr;13(4):345-346. doi: 10.1038/nchembio.2313.
  • Kepten E and Miné-Hattab J (2017) Lamin A: A key protein in chromatin motion. Med Sci. 33(2):126-130. doi: 10.1051/medsci/20173302004.
  • Krens SFG, Veldhuis JH, Barone V, Čapek D, Maître JL, Brodland GW, Heisenberg CP (2017) Interstitial fluid osmolarity modulates the action of differential tissue surface tension in progenitor cell segregation during gastrulation. Development 144(10):1798-1806. doi: 10.1242/dev.144964.
  • Loda A, Brandsma JH, Vassilev I, Servant N, Loos F, Amirnasr A, Splinter E, Barillot E, Poot RA, Heard E and Gribnau J (2017) Genetic and epigenetic features direct differential efficiency of Xist-mediated silencing at X-chromosomal and autosomal locations. Nat Commun. 8(1):690. doi: 10.1038/s41467-017-00528-1.
  • Maître JL (2017) Mechanics of blastocyst morphogenesis. Biol Cell. 109(9):323-338. doi: 10.1111/boc.201700029.
  • Maître JL (2017) Mechanics of inner cell mass formation. Biol Aujourd’hui. 211(2):137-148. doi: 10.1051/jbio/2017021.
  • Mathieu J and Huynh J-R (2017) Bam and Otu can regulate stem cell fate by stabilizing cyclin A. Proc Natl Acad Sci USA. 114(24):6154-6156. doi: 10.1073/pnas.1706840114.
  • Mathieu J and Huynh J-R (2017) Monitoring complete and incomplete abscission in the germ line stem cell lineage of Drosophila ovaries. Methods Cell Biol. 137, 105-118. doi: 10.1016/bs.mcb.2016.03.033.
  • Miné-Hattab J, Recamier V, Izeddin I, Rothstein R and Darzacq X (2017) Multi-scale tracking reveals scale-dependent chromatin dynamics after DNA damage. Mol. Biol. Cell. pii: mbc.E17-05-0317. doi: 10.1091/mbc.E17-05-0317.
  • Morel D, Almouzni G, Soria JC and Postel-Vinay S (2017) Targeting chromatin defects in selected solid tumors based on oncogene addiction, synthetic lethality and epigenetic antagonism. Ann. Oncol. 28(2):254-269. doi: 10.1093/annonc/mdw552.
  • Müller S and Almouzni G (2017) Chromatin dynamics during the cell cycle at centromeres. Nat Rev Genet. 18(3):192-208. doi: 10.1038/nrg.2016.157.
  • Park S, Gonzalez DG, Guirao B, Boucher JD, Cockburn K, Marsh ED, Mesa KR, Brown S, Rompolas P, Haberman AM, Bellaïche Y and Greco V (2017) Tissue-scale coordination of cellular behaviour promotes epidermal wound repair in live mice. Nat Cell Biol. 19(2):155-163. doi: 10.1038/ncb3472.
  • Perez-Rico YA, Boeva V, Mallory AC, Bitetti A, Majello S, Barillot E and Shkumatava A* (2017) Comparative analyses of super-enhancers reveal conserved elements in vertebrate genomes. Genome Res. 27(2):259-268. doi: 10.1101/gr.203679.115.
  • Pinheiro D, Hannezo E, Herszterg S, Bosveld F, Gaugue I, Balakireva M, Wang Z, Cristo I, Rigaud SU, Markova O and Bellaïche Y* (2017) Transmission of cytokinesis forces via E-cadherin dilution and actomyosin flows. Nature 545(7652):103-107. doi: 10.1038/nature22041.
  • Pinheiro I & Heard E (2017) X chromosome inactivation: new players in the initiation of gene silencing. F1000Res. 6. pii: F1000 Faculty Rev-344. doi:  10.12688/f1000research.10707.1.
  • Pinheiro D and Bellaïche Y (2017) Studying cytokinesis in Drosophila epithelial tissues. Methods Cell Biol. 137:73-84. doi: 10.1016/bs.mcb.2016.04.013.
  • Portoso M, Ragazzini R, Brencic Z. Moiani A, Michaud A, Vassilev I, Wassef M, Servant N, Sargueil B and Margueron R* (2017) PRC2 is dispensable for HOTAIR-mediated transcriptional repression. EMBO J. 36(8):981-994. doi: 10.15252/embj.201695335.
  • Ranisavljevic N, Okamoto I, Heard E and Ancelin K (2017) RNA FISH to Study Zygotic Genome Activation in Early Mouse Embryos. Methods Mol Biol. 1605:133-145. doi: 10.1007/978-1-4939-6988-3_9.
  • Saavedra F, Rivera C, Rivas E, Merino P, Garrido D, Hernández S, Forné I, Vassias I, Gurard-Levin ZA, Alfaro I.E, Imhof A, Almouzni G and Loyola A (2017) PP32 and SET/TAF-Iβ proteins regulate the acetylation of newly synthesized histone H4. Nucleic Acids Res. 45(20):11700-11710. doi: 10.1093/nar/gkx775.
  • Sallé J, Gervais L, Boumard B, Stefanutti M, Siudeja K and Bardin AJ* (2017) Intrinsic regulation of enteroendocrine fate by Numb. EMBO J. 36(13):1928-1945. doi: 10.15252/embj.201695622.
  • Sauer P.V, Timm J, Liu D, Sitbon D, Boeri-Erba E, Velours C, Mücke N, Langowski J, Ochsenbein F, Almouzni G and Panne D (2017) Insights into the molecular architecture and histone H3-H4 deposition mechanism of yeast Chromatin assembly factor 1. eLife 6. pii: e23474. doi: 10.7554/eLife.23474.
  • Sitbon D, Podsypanina K, Yadav T and Almouzni G (2017) Shaping Chromatin in the Nucleus: The Bricks and the Architects. Cold Spring Harb Symp Quant Biol. 82:1-14. doi: 10.1101/sqb.2017.82.033753.
  • Siudeja K and Bardin AJ (2017) Somatic recombination in adult tissues: What is there to learn? Fly (Austin) 11(2):121-128. doi: 10.1080/19336934.2016.1249073.
  • Tarabay Y, Achour M, Teletin M, Ye T, Teissandier A, Mark M, Bourc’his D and Viville S (2017) Tex19 paralogs are new members of the piRNA pathway controlling retrotransposon suppression. J Cell Sci. 130(8):1463-1474. doi: 10.1242/jcs.188763.
  • Teissandier A and Bourc’his D (2017) Gene body DNA methylation conspires with H3K36me3 to preclude aberrant transcription. EMBO J. 36(11):1471-1473. doi: 10.15252/embj.201796812.
  • Tissot N, Lepesant JA, Bernard F, Legent K, Bosveld F, Martin C, Faklaris O, Bellaïche Y, Coppey M and Guichet A (2017) Distinct molecular cues ensure a robust microtubule-dependent nuclear positioning in the Drosophila oocyte. Nat Commun. 8:15168. doi: 10.1038/ncomms15168.
  • Vallot C, Patrat C, Collier AJ, Huret C, Casanova M, Liyakat Ali TM, Tosolini M, Frydman N, Heard E, Rugg-Gunn PJ and Rougeulle C (2017) XACT Noncoding RNA Competes with XIST in the Control of X Chromosome Activity during Human Early Development. Cell Stem Cell. 20(1):102-111. doi: 10.1016/j.stem.2016.10.014.
  • Veldhuis JH, Ehsandar A, Maître JL, Hiiragi T, Cox S, Brodland GW (2017) Inferring cellular forces from image stacks. Philos Trans R Soc Lond B Biol Sci. 372(1720). pii: 20160261. doi: 10.1098/rstb.2016.0261.
  • Wassef M*, Luscan A, Battistella A, Le Corre S, Li H, Wallace M, Vidaud M and Margueron R (2017) Versatile and precise gene-targeting strategies for functional studies in mammalian cell lines. Methods 121-122:45-54. doi: 10.1016/j.ymeth.2017.05.003.
  • Xu J, Carter AC, Gendrel AV, Attia M, Loftus J, Greenleaf WJ, Tibshirani R, Heard E and Chang HY (2017) Landscape of monoallelic DNA accessibility in mouse embryonic stem cells and neural progenitor cells. Nat Genet. 49(3):377-386. doi: 10.1038/ng.3769.

2016

  • Adam S, Dabin J, Chevallier O, Leroy O, Baldeyron C, Corpet A, Lomonte P, Renaud O, Almouzni G and Polo SE (2016) Real-time tracking of parental histones reveals their contribution to chromatin integrity following DNA damage. Mol Cell. 64(1):65-78. doi: 10.1016/j.molcel.2016.08.019.
  • Ancelin K, Syx L, Borensztein M, Ranisavljevic N, Vassilev I, Briseño-Roa L, Liu T, Metzger E, Servant N, Barillot E, Chen CJ, Schüle R and Heard E (2016) Maternal LSD1/KDM1A is an essential regulator of chromatin and transcription landscapes during zygotic genome activation. eLife 5. pii: e08851. doi: 10.7554/eLife.08851.
  • Barau J, Teissandier A, Zamudio N, Roy S, Nalesso V, Hérault Y, Guillou F and Bourc’his D* (2016) The DNA methyltransferase DNMT3C protects male germ cells from transposon activity. Science 354:909-912. doi: 10.1126/science.aah5143
  • Bohm UL, Prendergast A, Djenoune L, Nunes Figueiredo S, Gomez J, Stokes C, Kaiser S, Suster M, Kawakami K, Charpentier M, Concordet JP, Rio JP, Del Bene F, and Wyart C (2016) CSF-contacting neurons regulate locomotion by relaying mechanical stimuli to spinal circuits. Nat Commun. 7:10866. doi: 10.1038/ncomms10866.
  • Bosveld F, Guirao B, Wang Z, Rivière M, Bonnet I M, Graner F and Bellaïche Y (2016) Modulation of junction tension by tumor suppressors and proto-oncogenes regulates cell-cell contacts. Development 143(4):623-34. doi: 10.1242/dev.127993.
  • Bosveld F*, Markova O, Guirao B, Martin C, Wang Z, Pierre A, Balakireva M, Gaugue I, Ainslie A, Christophorou N, Lubensky D.K, Minc N and Bellaïche Y*(2016) Epithelial tricellular junctions act as interphase cell shape sensors to orient mitosis. Nature 530(7591):495-8. doi: 10.1038/nature16970.
  • Cantone I, Bagci H, Dormann D, Dharmalingam G, Nesterova T, Brockdorff N, Rougeulle C, Vallot C, Heard E, Chaligne R, Merkenschlager M and Fisher AG (2016) Ordered chromatin changes and human X chromosome reactivation by cell fusion-mediated pluripotent reprogramming. Nat Commun. 7:12354. doi: 10.1038/ncomms12354.
  • Cooper S, Grijzenhout A, Underwood E, Ancelin K, Zhang T, Nesterova TB, Anil-Kirmizitas B, Bassett A, Kooistra SM, Agger K, Helin K, Heard E and Brockdorff N (2016) Jarid2 binds mono-ubiquitylated H2A lysine 119 to mediate crosstalk between Polycomb complexes PRC1 and PRC2. Nat Commun. 7:13661. doi: 10.1038/ncomms13661.
  • Coulon A and Larson DR (2016) Fluctuation Analysis: Dissecting Transcriptional Kinetics with Signal Theory. Methods Enzymol. 572:159-91. doi: 10.1016/bs.mie.2016.03.017.
  • Desponds J, Tran H, Ferraro T, Lucas T, Perez Romero C, Guillou A, Fradin C, Coppey M, Dostatni N, Walczak AM (2016) Precision of Readout at the hunchback Gene: Analyzing Short Transcription Time Traces in Living Fly Embryos. PLoS Comput Biol. 12(12):e1005256. doi: 10.1371/journal.pcbi.1005256.
  • Di Donato V, De Santis F, Auer T.O, Testa N, Sanchez-Iranzo H, Mercader N, Concordet J.P* and Del Bene F* (2016) 2C-Cas9: a versatile tool for clonal analysis of gene function. Genome Res. 26(5):681-692. doi: 10.1101/gr.196170.115.
  • Drinnenberg IA, Henikoff S and Malik HS (2016) Evolutionary Turnover of Kinetochore Proteins: A Ship of Theseus? Trends Cell Biol. 26(7):498-510. doi: 10.1016/j.tcb.2016.01.005.
  • Dunn T.W, Gebhardt C, Naumann E. A, Riegler C, Ahrens M. B, Engert F* and Del Bene F* (2016) Neural Circuits Underlying Visually Evoked Escapes in Larval Zebrafish. Neuron 89(3):613-28. doi: 10.1016/j.neuron.2015.12.021.
  • Ferraro T, Lucas T, Clémot M, De Las Heras Chanes J, Desponds J, Coppey M, Walczak AM and Dostatni N (2016) New methods to image transcription in living fly embryos: the insights so far, and the prospects. Wiley Interdiscip Rev Dev Biol. 5(3):296-310. doi: 10.1002/wdev.221.
  • Fontenas L, De Santis F, Di Donato V, Degerny C, Chambraud B, Del Bene F, and Tawk M (2016) Neuronal Ndrg4 Is Essential for Nodes of Ranvier Organization in Zebrafish. PLoS Genet. 12(11):e1006459. doi: 10.1371/journal.pgen.1006459.
  • Gauron C, Meda F, Dupont E, Albadri S, Quenech’Du N, Ipendey E, Volovitch M, Del Bene F, Joliot A, Rampon C, and Vriz S (2016) Hydrogen peroxide (H2O2) controls axon pathfinding during zebrafish development. Dev Biol 414(2):133-41. doi: 10.1016/j.ydbio.2016.05.004.
  • Giorgetti L†, Lajoie† B, Carter AC†, Attia M†, Zhan Y, Xu J, Chen CJ, Kaplan N, Chang HY, Heard E* and J Dekker* Structural organization of the inactive X chromosome. Nature 535(7613):575-9. doi: 10.1038/nature18589.
  • Guevorkian K and Maître JL (2016) Micropipette aspiration: a unique tool for exploring cell and tissue mechanics in vivo. Methods Cell Biol. 139:187-201. doi: 10.1016/bs.mcb.2016.11.012.
  • Gurard-Levin Z, Wilson L.O. Pancaldi V. Postel-Vinay S, Sousa F.G, Rayes C, Marangoni E, Gentien D, Valencia A, Pommier Y, Cottu P. and Almouzni G (2016) Chromatin regulators as a guide for cancer treatment choice. Mol Cancer Ther. 15(7):1768-77. doi: 10.1158/1535-7163.MCT-15-1008.
  • Haeussler M, Schonig K, Eckert H, Eschstruth A, Mianne J, Renaud J. B, Schneider-Maunoury S, Shkumatava A, Teboul L, Kent J, Joly JS and Concordet JP* (2016) Evaluation of off-target and on-target scoring algorithms and integration into the guide RNA selection tool CRISPOR. Genome Biol. 17(1):148. doi: 10.1186/s13059-016-1012-2.
  • Maison C, Bailly D, Quivy J.P and Almouzni G (2016) The methyltransferase Suv39h1 links the SUMO pathway to HP1α marking at pericentric heterochromatin. Nat Commun. 7:12224. doi: 10.1038/ncomms12224.
  • Maison C, Quivy JP and Almouzni G (2016) Suv39h1 links the SUMO pathway to constitutive heterochromatin. Mol Cell Oncol. 3(6):e1225546, doi : 10.1080/23723556.2016.122554.
  • Maître JL, Turlier H, Illukkumbura R, Eismann B, Nédélec F and Hiiragi T (2016) Asymmetric division of contractile domains couples cell positioning and fate specification. Nature 536(7616):344-8. doi: 10.1038/nature18958.
  • Maupetit-Mehouas S, Montibus B, Nury D, Tayama C, Wassef M, Kota SK, Fogli A, Cerqueira Campos F, Hata K, Feil R, Margueron R, Nakabayashi K, Court F and Arnaud P (2016) Imprinting control regions (ICRs) are marked by mono-allelic bivalent chromatin when transcriptionally inactive. Nucleic Acids Res. 44(2):621-35. doi: 10.1093/nar/gkv960.
  • Miné-Hattab J (2016) Lasker award 2015: Spotlight on DNA repair. Med Sci. 32(1):123-4. doi: 10.1051/medsci/20163201021.
  • Müller S and Almouzni G (2016) Chromatin dynamics during the cell cycle at centromeres. Nat Rev Genet. 18(3):192-208. doi: 10.1038/nrg.2016.157.
  • Mulugeta E, Wassenaar E, Sleddens-Linkels E, van IJcken WF, Heard E, Grootegoed JA, Just W, Gribnau J and Baarends WM (2016) Genomes of Ellobius species provide insight into the evolutionary dynamics of mammalian sex chromosomes. Genome Res. 26(9):1202-10. doi: 10.1101/gr.201665.115.
  • Nikolov I and Taddei A (2016) Linking replication stress with heterochromatin formation. Chromosoma 125(3):523-33. doi: 10.1007/s00412-015-0545-6.
  • Orsi GA, Naughtin M and Almouzni G (2016) The epigenome and cancer stem cell fate: Connected by a linker histone variant. Cell Stem Cell. 19(5):567-568. doi: 10.1016/j.stem.2016.10.010.
  • Prendergast L, Müller S, Liu Y, Huang H, Dingli F, Loew D, Vassias I, Patel D.J, Sullivan KF and Almouzni G (2016) The CENP-T/-W complex is a binding partner of the histone chaperone FACT. Genes Dev. 30(11):1313-26. doi: 10.1101/gad.275073.115.
  • Rubin T, Christophorou N and Huynh J-R (2016) How to pre-pair chromosomes for meiosis. Cell Cycle 15(5):609-10. doi: 10.1080/15384101.2015.1131524.
  • Shah RR, Cholewa-Waclaw J, Davies FC, Paton KM, Chaligne R, Heard E, Abbott CM and Bird AP (2016) Efficient and versatile CRISPR engineering of human neurons in culture to model neurological disorders. Wellcome Open Res. 1:13. doi: 10.12688/wellcomeopenres.10011.1.
  • Schoumacher M, Le Corre S, Houy A, Mulugeta E, Stern MH, Roman-Roman S and Margueron R (2016) Uveal melanoma cells are resistant to EZH2 inhibition regardless of BAP1 status. Nat Med. 22(6):577-8. doi: 10.1038/nm.4098.
  • Subramanian VV, MacQueen AJ, Vader G, Shinohara M, Sanchez A, Borde V, Shinohara A and Hochwagen A (2016) Chromosome synapsis alleviates Mek1-dependent suppression of meiotic DNA repair. PloS Biology 14(2):e1002369. doi: 10.1371/journal.pbio.1002369.
  • Tiana G, Amitai A, Pollex T, Piolot T, Holcman D, Heard E and Giorgetti L (2016) Structural fluctuations of the chromatin fiber within topologically associating domains. Biophys J. 110(6):1234-45. doi: 10.1016/j.bpj.2016.02.003.
  • Walter M, Teissandier A, Pérez Palacios R and Bourc’his D* (2016) An epigenetic switch ensures transposon repression upon dynamic loss of DNA methylation in embryonic stem cells. eLife 5. pii:e11418. doi:10.7554/eLife.11418.
  • Wassef M and Margueron R (2016) The Multiple Facets of PRC2 Alterations in Cancers. J Mol Biol. 429(13):1978-1993. doi: 10.1016/j.jmb.2016.10.012.
  • Wassef M, Michaud A and Margueron R (2016) Association between EZH2 expression, silencing of tumor suppressors and disease outcome in solid tumors. Cell Cycle 15(17):2256-62. doi: 10.1080/15384101.2016.1208872.

2015

  • Auer TO*, Xiao T, Bercier V, Gebhardt C, Duroure K, Concordet J. P, Wyart C, Suster M, Kawakami K, Wittbrodt J, Baier H and Del Bene F* (2015) Deletion of a kinesin I motor unmasks a mechanism of homeostatic branching control by neurotrophin-3. eLife 4. doi: 10.7554/eLife.05061.
  • Borde V, de Massy B (2015) Meiosis: Early DNA Double-Strand Breaks Pave the Way for Inter-Homolog Repair. Dev Cell. 32(6):663-4. doi: 10.1016/j.devcel.2015.03.011.
  • Bourc’his D* (2015) Cartographie des profils de méthylation de l’ADN: quelles méthodes, pour quelle résolution et quel coût ? (2015) Corr. Onco-Théranostic, Vol IV-n°1-janv-fév-mars.
  • Bruno C, Carmignac V, Netchine I, Choux C, Duffourd Y, Faivre L, Thauvin-Robinet C, Le Bouc Y, Sagot P, Bourc’his D and Fauque P (2015) Germline correction of an epimutation related to Silver-Russell syndrome. Hum Mol Genet. 24(12):3314-21. doi: 10.1093/hmg/ddv079.
  • Chaligne R, Popova T, Mendoza-Parra M-A, Saleem M-AM, Gentien D, Ban K, Piolot T, Leroy O, Mariani O, Gronemeyer H, Vincent-Salomon A, Stern M-H and Heard E (2015) The inactive X chromosome is epigenetically unstable and transcriptionally labile in breast cancer. Genome Res. 25(4):488-503. doi: 10.1101/gr.185926.114.
  • Cheloufi S, Elling U, Hopfgartner B, Jung YL, Murn J, Ninova M, Hubmann M, Badeaux AI, Ang CE, Tenen D, Wesche DJ, Abazova N, Hogue M, Tasdemir N, Brumbaugh J, Rathert P, Jude J, Ferrari F, Blanco A, Fellner M, Wenzel D, Zinner M, Vidal SE, Bell O, Stadtfeld M, Chang HY, Almouzni G, Lowe SW, Rinn J, Wernig M, Aravin A, Shi Y, Park PJ, Penninger JM, Zuber J and Hochedlinger K (2015) The histone chaperone CAF-1 safeguards somatic cell identity. Nature 528(7581):218-24. doi: 10.1038/nature15749.
  • Chu C, Zhang QC, da Rocha ST, Flynn RA, Bharadwaj M, Calabrese JM, Magnuson T, Heard E and Chang HY (2015) Systematic Discovery of Xist RNA Binding Proteins. Cell 161(2):404-16. doi: 10.1016/j.cell.2015.03.025.
  • Christophorou N, Rubin T, Bonnet I, Piolot T, Arnaud M, Huynh J-R (2015) Microtubule-driven nuclear rotations promote meiotic chromosome dynamics. Nat Cell Biol. 17(11):1388-400. doi: 10.1038/ncb3249.
  • Clement C and Almouzni G (2015) MCM2 binding to histones H3-H4 and ASF1 supports a tetramer-to-dimer model for histone inheritance at the replication fork. Nat Struct Mol Biol. 22(8):587-9. doi: 10.1038/nsmb.3067.
  • Dekker J and Heard E (2015) Structural and functional diversity of Topologically Associating Domains. FEBS Lett. 589(20 Pt A):2877-84. doi: 10.1016/j.febslet.2015.08.044.
  • De Oca RM, Gurard-Levin ZA, Berger F, Rehman H, Martel E, Corpet A, de Koning L, Vassias I, Wilson LOW, Meseure D, Reyal F, Savignoni A, Asselain B, Sastre-Garauk X and Almouzni G (2015) The histone chaperone HJURP is a new independent prognostic marker for luminal A breast carcinoma. Mol Oncol. 9(3):657-74. doi: 10.1016/j.molonc.2014.11.002.
  • Eikenes AH, Malerod L, Christensen AL, Steen CB, Mathieu J, Nezis IP, Liestol K, Huynh J-R, Stenmark H and Haglund K (2015) ALIX and ESCRT-III Coordinately Control Cytokinetic Abscission during Germline Stem Cell Division In Vivo. Plos Genet. 11(1):e1004904. doi: 10.1371/journal.pgen.1004904.
  • Fernandez-Sanchez ME, Barbier S, Whitehead J, Bealle G, Michel A, Latorre-Ossa H, Rey C, Fouassier L, Claperon A, Brulle L, Girard E, Servant N, Rio-Frio T, Marie H, Lesieur S, Housset C, Gennisson J-L, Tanter M, Menager C, Fre S, Robine S and Farge E (2015) Mechanical induction of the tumorigenic beta-catenin pathway by tumour growth pressure. Nature 523(7558):92-5. doi: 10.1038/nature14329.
  • Fidelin K, Djenoune L, Stokes C, Prendergast A, Gomez J, Baradel A, Del Bene F and Wyart C (2015) State-Dependent Modulation of Locomotion by GABAergic Spinal Sensory Neurons. Curr Biol. 25(23):3035-47. doi: 10.1016/j.cub.2015.09.070.
  • Galupa R and Heard E (2015) X-chromosome inactivation: new insights into cis and trans regulation. Curr Opin Genet Dev. 31:57-66. doi: 10.1016/j.gde.2015.04.002.
  • Giorgetti L, Piolot T and Heard E (2015) High-Resolution 3D DNA FISH Using Plasmid Probes and Computational Correction of Optical Aberrations to Study Chromatin Structure at the Sub-megabase Scale. Methods Mol Biol. 1262:37-53. doi: 10.1007/978-1-4939-2253-6_3.
  • Gogendeau D, Siudeja K, Gambarotto D, Pennetier C, Bardin AJ and Basto R (2015) Aneuploidy causes premature differentiation of neural and intestinal stem cells. Nat Commun. 6:8894. doi: 10.1038/ncomms9894.
  • Greenberg MV and Bourc’his D* (2015) Cultural relativism: maintenance of genomic imprints in pluripotent stem cell culture systems. Curr Opin Genet Dev. 31:42-49. doi: 10.1016/j.gde.2015.04.005.
  • Guidi M, Ruault M, Marbouty M, Loiodice I, Cournac A, Billaudeau C, Hocher A, Mozziconacci J, Koszul R, Taddei A (2015) Spatial reorganization of telomeres in long-lived quiescent cells. Genome Biol. 16:206. doi: 10.1186/s13059-015-0766-2.
  • Liao H-F, Mo C-F, Wu S-C, Cheng D-H, Yu C-Y, Chang K-W, Kao T-H, Lu C-W, Pinskaya M, Morillon A, Lin S-S, Cheng WTK, Bourc’his D, Bestor T, Sung L-Y, Lin S-P (2015) Dnmt3l-knockout donor cells improve somatic cell nuclear transfer reprogramming efficiency. Reproduction. 150(4):245-56. doi: 10.1530/REP-15-0031.
  • Mallory AC and Shkumatava A* (2015) LncRNAs in vertebrates: advances and challenges. Biochimie 117:3-14. doi: 10.1016/j.biochi.2015.03.014.
  • Martin-Bermudo M-D, Bardet P-L, Bellaiche Y, Malartre M. (2015) The vav oncogene antagonises EGFR signalling and regulates adherens junction dynamics during Drosophila eye development. Development 142(8):1492-501. doi: 10.1242/dev.110585.
  • Matias N. R, Mathieu J and Huynh J-R* (2015) Abscission is regulated by the ESCRT-III protein shrub in Drosophila germline stem cells. PLoS Genet. 11(2):e1004653. doi: 10.1371/journal.pgen.1004653.
  • Molla-Herman A, Valles A.M, Ganem-Elbaz C, Antoniewski C and Huynh J-R* (2015) tRNA processing defects induce replication stress and Chk2-dependent disruption of piRNA transcription. EMBO J. 34(24):3009-27. doi: 10.15252/embj.201591006.
  • Montes de Oca R, Gurard-Levin ZA, Berger F, Rehman H, Martel E, Corpet A, de Koning L, Vassias I, Wilson LOW, Meseure D, Reyal F, Savignoni A, Asselain B, Sastre-Garau X, Almouzni G (2015) The histone chaperone HJURP is a new independent prognostic marker for luminal A breast carcinoma. Mol Oncol. 9(3):657-74. doi: 10.1016/j.molonc.2014.11.002.
  • Paolini A, Duchemin A-L, Albadri S, Patzel E, Bornhorst D, Avalos PG, Lemke S, Machate A, Brand M, Sel S, Di Donato V, Del Bene F, Zolessi FR, Ramialison M, Poggi L (2015) Asymmetric inheritance of the apical domain and self-renewal of retinal ganglion cell progenitors depend on Anillin function. Development. 142(5):832-9. doi: 10.1242/dev.118612.
  • Polo SE and Almouzni G (2015) Chromatin dynamics after DNA damage: The legacy of the access-repair-restore model. DNA Repair. 36:114-21. doi: 10.1016/j.dnarep.2015.09.014..
  • Richet N, Liu D, Legrand P, Velours C, Corpet A, Gaubert A, Bakail M, Moal-Raisin G, Guerois R, Compper C, Besle A, Guichard B, Almouzni G and Ochsenbein F (2015) Structural insight into how the human helicase subunit MCM2 may act as a histone chaperone together with ASF1 at the replication fork. Nucleic Acids Res. 43(3):1905-17. doi: 10.1093/nar/gkv021.
  • Rivera C, Saavedra F, Alvarez F, Diaz-Celis C, Ugalde V, Li J, Forne I, Gurard-Levin ZA, Almouzni G, Imhof A and Loyola A (2015) Methylation of histone H3 lysine 9 occurs during translation. Nucleic Acids Res. 43(19):9097-106. doi: 10.1093/nar/gkv929.
  • Rodilla V, Dasti A, Huyghe M, Lafkas D, Laurent C, Reyal F and S. Fre (2015) Luminal Progenitors Restrict Their Lineage Potential during Mammary Gland Development. PLoS Biol. 13(2):e1002069. doi: 10.1371/journal.pbio.1002069.
  • Romanoski CD, Glass CK, Stunnenberg HG, Wilson L and Almouzni G (2015) Epigenomics: Roadmap for regulation. Nature 518(7539):314-6. doi: 10.1038/518314a.
  • Romeo K, Louault Y, Cantaloube S, Loiodice I, Almouzni G and Quivy J-P (2015) The SENP7 SUMO-Protease Presents a Module of Two HP1 Interaction Motifs that Locks HP1 Protein at Pericentric Heterochromatin. Cell Reports 14(10):771-82. doi: 10.1016/j.celrep.2015.01.004.
  • Sanulli, S, Justin N, Teissandier A, Ancelin K, Portoso M, Caron M, Michaud A, Lombard B, da Rocha S.T, Offer J, Loew L, Servant N, Wassef M, Burlina F, Gamblin S.J, Heard E and Margueron R* (2015) Jarid2 Methylation via the PRC2 Complex Regulates H3K27me3 Deposition during Cell Differentiation. Mol. Cell. 57(5):769-783. doi: 10.1016/j.molcel.2014.12.020.
  • Servant N, Varoquaux N, Lajoie BR, Viara E, Chen C-J, Vert J-P, Heard E, Dekker J and Barillot E (2015) HiC-Pro: an optimized and flexible pipeline for Hi-C data processing. Genome Biol. 16:259. doi: 10.1186/s13059-015-0831-x.
  • Siudeja K, Nassari S, Gervais L, Skorski P, Lameiras S, Stolfa D, Zande M, Bernard V, Rio Frio T and Bardin A.J* (2015) Frequent Somatic Mutation in Adult Intestinal Stem Cells Drives Neoplasia and Genetic Mosaicism during Aging. Cell Stem Cell. 17(6):663-674. doi: 10.1016/j.stem.2015.09.016.
  • Tachiwana H, Mueller S, Bluemer J, Klare K, Musacchio A and Almouzni G (2015) HJURP Involvement in De Novo CenH3(CENP-A) and CENP-C Recruitment. Cell Rep. 11(1):22-32. doi: 10.1016/j.celrep.2015.03.013.
  • Tiana G, Villa F, Zhan Y, Capelli R, Paissoni C, Sormanni P, Heard E, Giorgetti L and Meloni R (2015) MonteGrappa: An iterative Monte Carlo program to optimize biomolecular potentials in simplified models. Comput Phys Commun. 186:93-104. doi: 10.1016/j.cpc.2014.09.012.
  • Wassef M, Rodilla V, Teissandier A, Zeitouni B, Gruel N, Sadacca B, Irondelle M, Charruel M, Ducos B, Michaud A, Caron M, Marangoni E, Chavrier P, Le Tourneau C, Kamal M, Pasmant E, Vidaud M, Servant N, Reyal F, Meseure E, Vincent-Salomon A, Fre S and Margueron R (2015) Impaired PRC2 activity promotes transcriptional instability and favors breast tumorigenesis. Genes Dev. 29(24):2547-62. doi: 10.1101/gad.269522.115.
  • Zamudio N, Barau J, Teissandier A, Walter M, Borsos M, Servant N and Bourc’his D (2015) DNA methylation restrains transposons from adopting a chromatin signature permissive for meiotic recombination. Genes Dev. 29(12):1256-70. doi: 10.1101/gad.257840.114.

2014

  • Almouzni G, Altucci L, Amati B, Ashley N, Baulcombe D, Beaujean N, Bock C, Bongcam-Rudloff E, Bousquet J, Braun S, Bressac-de Paillerets B, Bussemakers M, Clarke L, Conesa A, Estivill X, Fazeli A, Grgurević N, Gut I, Heijmans BT, Hermouet S, Houwing–Duistermaat J, Iacobucci I, Ilaš J, Kandimalla R, Krauss-Etschmann S, Lasko P, Lehmann S, Lindroth A, Majdič G, Marcotte E, Martinelli G, Martinet N, Meyer E, Miceli C, Mills K, Moreno-Villanueva M, Morvan G, Nickel D, Niesler B, Nowacki M, Nowak J, Ossowski S, Pelizzola M, Pochet R, Potočnik U, Radwanska M, Raes J, Rattray M, Robinson MD, Roelen B, Sauer S, Schinzer D, Slagboom E, Spector T, Stunnenberg HG, Tiligada E, Torres-Padilla ME, Tsonaka R, Van Soom A, Vidaković M and Widschwendter M (2014) Relationship between genome and epigenome – challenges and requirements for future research. BMC Genomics 15(1): 487. doi: 10.1186/1471-2164-15-487.
  • Arimura Y, Shirayama K, Horikoshi N, Fujita R, Taguchi H, Kagawa W, Fukagawa T, Almouzni G and Kurumizaka H (2014) Crystal structure and stable property of the cancer-associated heterotypic nucleosome containing CENP-A and H3.3. Sci Rep. 4:7115. doi: 10.1038/srep07115.
  • Auer T.O* and Del Bene F* (2014) CRISPR/Cas9 and TALEN-mediated knock-in approaches in zebrafish. Methods 69(2):142-50. doi: 10.1016/j.ymeth.2014.03.027.
  • Auer TO, Duroure K, Concordet JP and Del Bene F (2014) CRISPR/Cas9-mediated conversion of eGFP- into Gal4-transgenic lines in zebrafish. Nat Protoc. 9(12):2823-40. doi: 10.1038/nprot.2014.187.
  • Auer TO, Duroure K, De Cian A, Concordet JP and Del Bene F (2014) Highly efficient CRISPR/Cas9-mediated knock-in in zebrafish by homology-independent DNA repair. Genome Res. 24(1):142-53. doi: 10.1101/gr.161638.113.
  • Beuzer P, Quivy JP and Almouzni G (2014) Establishment of a replication fork barrier following induction of DNA binding in mammalian cells. Cell Cycle 13(10):1607-16. doi: 10.4161/cc.28627.
  • Borde V and Lichten M (2014) A Timeless but timely connection between replication and recombination. Cell 158(4):697-698. doi: 10.1016/j.cell.2014.07.029.
  • Bouissou A, Vérollet C, de Forges H, Haren L, Bellaïche Y, Perez F, Merdes A and Raynaud-Messina B (2014) γ-Tubulin Ring Complexes and EB1 play antagonistic roles in microtubule dynamics and spindle positioning. EMBO J. 33(2):114-28. doi: 10.1002/embj.201385967.
  • Boyarchuk* E, Filipescu* D, Vassias I, Cantaloube S and Almouzni G (2014) The histone variant composition of centromeres is controlled by the pericentric heterochromatin state during the cell cycle. J Cell Sci. 127(Pt 15):3347-59. doi: 10.1242/jcs.148189.
  • Chanrion M, Kuperstein I, Barrière C, El Marjou F, Cohen D, Vignjevic D, Stimmer L, Paul-Gilloteaux P, Bièche I, Tavares Sdos R, Boccia GF, Cacheux W, Meseure D, Fre S, Martignetti L, Legoix-Né P, Girard E, Fetler L, Barillot E, Louvard D, Zinovyev A and Robine S (2014) Concomitant Notch activation and p53 deletion trigger epithelial-to-mesenchymal transition and metastasis in mouse gut. Nat Commun. 5:5005. doi: 10.1038/ncomms6005.
  • Chaligné R and Heard E (2014) X-chromosome inactivation in development and cancer. FEBS Lett. 588(15):2514-22. doi: 10.1016/j.febslet.2014.06.023.
  • Chelmicki T, Dündar F, Turley MJ, Khanam T, Aktas T, Ramírez F, Gendrel AV, Wright PR, Videm P, Backofen R, Heard E, Manke T and Akhtar A (2014) MOF-associated complexes ensure stem cell identity and Xist repression. eLife 3:e02024. doi: 10.7554/eLife.02024.
  • Da Rocha ST, Boeva V, Escamilla-Del-Arenal M, Ancelin K, Granier C, Matias NR, Sanulli S, Chow J, Schulz E, Picard C, Kaneko S, Helin K, Reinberg D, Stewart AF, Wutz A, Margueron R and Heard E (2014) Jarid2 Is Implicated in the Initial Xist-Induced Targeting of PRC2 to the Inactive X Chromosome. Mol Cell. 53(2):301-16. doi: 10.1016/j.molcel.2014.01.002.
  • Djenoune L, Khabou H, Joubert F, Quan FB, Nunes Figueiredo S, Bodineau L, Del Bene F, Burcklé C, Tostivint H and Wyart C (2014) Investigation of spinal cerebrospinal fluid-contacting neurons expressing PKD2L1: evidence for a conserved system from fish to primates. Front Neuroanat 8:26. doi: 10.3389/fnana.2014.00026. eCollection 2014.
  • Duffié R, Ajjan S, Greenberg MV, Zamudio N, Escamilla del Arenal M, Iranzo J, Okamoto I, Barbaux S, Fauque P and Bourc’his D (2014) The Gpr1/Zdbf2 locus provides new paradigms for transient and dynamic genomic imprinting in mammals. Genes Dev. 28(5):463-78. doi: 10.1101/gad.232058.113.
  • Filipescu* D, Muller* S and Almouzni G (2014) Histone H3 variants and their chaperones during development and disease: contributing to epigenetic control. Annu Rev Dev Biol. 615-46. doi: 10.1146/annurev-cellbio-100913-013311.
  • Gendrel AV, Attia M, Chen CJ, Diabangouaya P, Servant N, Barillot E and Heard E (2014) Developmental dynamics and disease potential of random monoallelic gene expression. Dev Cell. 28(4):366-80. doi: 10.1016/j.devcel.2014.01.016.
  • Gendrel AV and Heard E (2014) Noncoding RNAs and epigenetic mechanisms during X-chromosome inactivation. Annu Rev Cell Dev Biol. 30:561-80. doi: 10.1146/annurev-cellbio-101512-122415.
  • Germann M, Xu H, Malaterre J, Sampurno S, Huyghe M, Cheasley D, Fre S and Ramsay RG (2014) Tripartite interactions between Wnt signaling, Notch and Myb for stem/progenitor cell functions during intestinal tumorigenesis. Stem Cell Res. 13(3 Pt A):355-66. doi: 10.1016/j.scr.2014.08.002.
  • Giorgetti L, Galupa R, Nora,EP, Lam F, Piolot T, Dekker J, Tiana G* and Heard E* (2014) Predictive polymer modeling reveals coupled fluctuations in chromosome conformation and transcription. Cell 157(4):950-63. doi: 10.1016/j.cell.2014.03.025.
  • Gurard-Levin ZA and Almouzni G (2014) Histone modifications and a choice of variant: a language that helps the genome express itself. F1000Prime Rep 6:76. doi:10.12703/P6-76.
  • Gurard-Levin ZA, Quivy JP and Almouzni G (2014) Histone chaperones: Assisting histone traffic and nucleosome dynamics. Annu Rev Biochem. 83:487-517. doi: 10.1146/annurev-biochem-060713-035536.
  • Gurard-Levin ZA and Almouzni G (2014) Histone modifications and a choice of variant: a language that helps the genome express itself. F1000Prime Rep. 6:76. doi:10.12703/P6-76.
  • Heard E and Martienssen RA (2014) Trans-generational epigenetic inheritance: myths and mechanisms. Cell 157(1):95-109. doi: 10.1016/j.cell.2014.02.045.
  • Herszterg S, Pinheiro D and Bellaïche Y (2014) A multicellular view of cytokinesis in epithelial tissue. Trends Cell Biol. 24(5):285-93. doi: 10.1016/j.tcb.2013.11.009.
  • Lacoste N, Woolfe A, Tachiwana H, Garea A.V, Barth T, Cantaloube S, Kurumizaka H, Imhof A and Almouzni G (2014) Mislocalization of the centromeric histone variant CenH3/CENP-A in human cells depends on the chaperone DAXX. Mol. Cell 53(4):631-44. doi: 10.1016/j.molcel.2014.01.018.
  • Loiodice, I, Dubarry M and Taddei A (2014) Scoring and manipulating gene position and dynamics using FROS in budding yeast. Curr Protoc Cell Biol. 62:unit 22.17.1-14. doi: 10.1002/0471143030.cb2217s62.
  • Molla-Herman A, Matias RN and Huynh J-R (2014) Chromatin modifications regulate germ cell development and transgenerational information relay. Curr. Opin. Insect Sci. 1:10-18. doi: 10.1016/j.cois.2014.04.002.
  • Montes de Oca R, Gurard-Levin Z.A, Berger F, Rehman H, Martel E, Corpet A, de Koning L, Vassias I, Wilson L.O, Meseure D, Reyal F, Savignoni A, Asselain B, Sastre-Garau X and Almouzni G (2014) The histone chaperone HJURP is a new independent prognostic marker for luminal A breast carcinoma. Mol Oncol. 9(3):657-74. doi: 10.1016/j.molonc.2014.11.002.
  • Mozzetta C, Pontis J, Fritsch L, Robin P, Portoso M, Proux C, Margueron R and Ait-Si-Ali S (2014) The histone H3 lysine 9 methyltransferases G9a and GLP regulate polycomb repressive complex 2-mediated gene silencing. Mol Cell. 53(2):277-89. doi: 10.1016/j.molcel.2013.12.005.
  • Müller S and Almouzni G (2014) A network of players in H3 histone variant deposition and maintenance at centromeres. Biochim Biophys Acta 1839(3):241-50. doi: 10.1016/j.bbagrm.2013.11.008.
  • Müller S, Montes de Oca R, Lacoste N, Dingli F, Loew D and Almouzni G (2014) Phosphorylation and DNA-binding of HJURP determine its centromeric recruitment and function in CenH3CENP-A loading. Cell Rep. 8(1):190-203. doi: 10.1016/j.celrep.2014.06.002.
  • O’Sullivan RJ and Almouzni G (2014) Assembly of telomeric chromatin to create ALTernative endings. Trends Cell Biol. 24(11):675-85. doi: 10.1016/j.tcb.2014.07.007.
  • O’Sullivan R.J, Arnoult N, Lackner D.H, Organesian L, Haggblom C, Corpet A, Almouzni G and Karlseder J (2014) Rapid induction of the alternative lengthening of telomeres by depletion of the histone chaperone ASF1. Nat Struct Mol Biol. 21(2):167-74. doi: 10.1038/nsmb.2754.
  • Pinheiro D and Bellaïche Y (2014) Making the most of the midbody remnant: specification of the dorsal-ventral axis. Dev Cell. 28(3):219-20. doi: 10.1016/j.devcel.2014.01.026.
  • Rivera C, Gurard-Levin ZA, Almouzni G and Loyola A (2014) Histone lysine methylation and chromatin replication. Biochim Biophys Acta 1839(12):1433-9. doi: 10.1016/j.bbagrm.2014.03.009.
  • Schulz EG, Meisig J, Nakamura T, Okamoto I, Sieber A, Picard C, Borensztein M, Saitou M, Blüthgen N and Heard E (2014) The two active X chromosomes in female ESCs block exit from the pluripotent state by modulating the ESC signaling network. Cell Stem Cell. 14(2):203-16. doi: 10.1016/j.stem.2013.11.022.
  • Tagu D, Le Trionnaire G, Tanguy S, Gauthier JP and Huynh JR (2014) EMS mutagenesis in the pea aphid Acyrthosiphon pisum. G3 (Bethesda). 4(4):657-67. doi: 10.1534/g3.113.009639.
  • Zuryn S, Ahier A, Portoso M, White ER, Morin MC, Margueron R and Jarriault S (2014) Transdifferentiation. Sequential histone-modifying activities determine the robustness of transdifferentiation. Science 345(6198):826-9. doi: 10.1126/science.1255885.

2013

  • Abascal F, Corpet A, Gurard-Levin ZA, Juan D, Ochsenbein F, Rico D, Valencia A and Almouzni G (2013) Subfunctionalization via Adaptive Evolution Influenced by Genomic Context: The Case of Histone Chaperones ASF1a and ASF1b. Mol Biol Evol. 30(8):1853-66. doi: 10.1093/molbev/mst086.
  • Adam S, Polo SE and Almouzni G (2013) Transcription recovery after DNA damage requires chromatin priming by the H3.3 histone chaperone HIRA. Cell 155(1):94-106. doi: 10.1016/j.cell.2013.08.029.
  • Andriatsilavo, M, Gervais, L, Fons, C and Bardin AJ (2013) The Drosophila midgut as a model to study adult stem cells. Med Sci. 29(1):75-81. doi: 10.1051/medsci/2013291016.
  • Alt F and Almouzni G (2013) Genome architecture and expression. Curr Opin Genet Dev. 23(2):79-80. doi: 10.1016/j.gde.2013.04.005.
  • Bardet PL, Guirao B, Paoletti C, Serman F, Léopold V, Bosveld F, Goya Y, Mirouse V, Graner F, Bellaïche Y (2013) PTEN Controls Junction Lengthening and Stability during Cell Rearrangement in Epithelial Tissue. Dev Cell. 25(5):534-46. doi: 10.1016/j.devcel.2013.04.020.
  • Bennett G, Papamichos-Chronakis M and Peterson CL (2013) DNA repair choice defines a common pathway for recruitment of chromatin regulators. Nat Commun. 4:2084. doi: 10.1038/ncomms3084.
  • Borde V and de Massy B (2013) Programmed induction of DNA double strand breaks during meiosis: setting up communication between DNA and the chromosome structure. Curr Opin Genet Dev. 23(2):147-55. doi: 10.1016/j.gde.2012.12.002.
  • Carballo JA, Panizza S, Serrentino ME, Johnson AL, Geymonat M, Borde V, Klein F and Cha RS (2013) Budding yeast ATM/ATR control meiotic double-strand break (DSB) levels by down-regulating Rec114, an essential component of the DSB-machinery. PLoS Genet. 9(6):e1003545. doi: 10.1371/journal.pgen.1003545.
  • Casanova M, Pasternak M, El Marjou F, Le Baccon P, Probst AV and Almouzni G (2013) Heterochromatin reorganization during early mouse development requires a single-stranded noncoding transcript. Cell Rep. 4(6):1156-67. doi: 10.1016/j.celrep.2013.08.015.
  • Cavodeassi F, Del Bene F, Fürthauer M, Grabher C, Herzog W, Lehtonen S, Linker C, Mercader N, Mikut R, Norton W, Strähle U, Tiso N (2013) Report of the Second European Zebrafish Principal Investigator Meeting in Karlsruhe, Germany, March 21-24, 2012. Zebrafish 10(1):119-23. doi: 10.1089/zeb.2012.0829. Epub 2013 Mar 26.
  • Chen CJ and Heard E (2013) Small RNAs derived from structural non-coding RNAs. Methods 63(1):76-84. doi: 10.1016/j.ymeth.2013.05.001.
  • Christophorou N, Rubin T and Huynh J-R* (2013) Synaptonemal complex components promote centromere pairing in pre-meiotic germ cells. PLoS Genet. 9(12):e1004012. doi: 10.1371/journal.pgen.1004012.
  • Corbel C, Diabangouaya P, Gendrel AV, Chow JC, Heard E (2013) Unusual chromatin status and organization of the inactive X chromosome in murine trophoblast giant cells. Development 140(4):861-72. doi: 10.1242/dev.087429.
  • Degoutin JL, Milton CC, Yu EF, Tipping M, Bosveld F, Yang L, Bellaiche Y, Veraksa, A and Harvey KF (2013) Riquiqui and Minibrain are regulators of the Hippo pathway downstream of Dachsous. Nat Cell Biol. 15(10):1176-85. doi: 10.1038/ncb2829.
  • de Wit E, Bouwman BA, Zhu Y, Klous P, Splinter E, Verstegen MJ, Krijger PH, Festuccia N, Nora EP, Welling M, Heard E, Geijsen N, Poot RA, Chambers I and de Laat W (2013) The pluripotent genome in three dimensions is shaped around pluripotency factors. Nature 501(7466):227-31. doi: 10.1038/nature12420.
  • Di Donato V, Auer TO, Duroure K and Del Bene F (2013) Characterization of the calcium binding protein family in zebrafish. PLoS One 8(1):e53299. doi: 10.1371/journal.pone.0053299.
  • Duffié R and Bourc’his D (2013) Parental epigenetic asymmetry in mammals. Curr Top Dev Biol. 104:293-328. doi: 10.1016/B978-0-12-416027-9.00009-7.
  • Escamilla-Del-Arenal M, da Rocha ST, Spruijt CG, Masui O, Renaud O, Smits AH, Margueron R, Vermeulen M and Heard E (2013) Cdyl: a new partner of the inactive X chromosome and potential reader of H3K27me3 and H3K9me2. Mol Cell Biol. 33(24):5005-20. doi: 10.1128/MCB.00866-13.
  • Etoc, F, Lisse, D, Bellaiche, Y, Piehler, J, Coppey, M, and Dahan M (2013) Subcellular control Rac-GTPase signalling by magnetogenetic manipulation inside living cells. Nat Nanotechnol. 8(3):193-8. doi: 10.1038/nnano.2013.23.
  • Filipescu D, Szenker E and Almouzni G (2013) Developmental roles of histone H3 variants and their chaperones. Trends Genet. 29(11):630-40. doi: 10.1016/j.tig.2013.06.002.
  • Gebhardt C, Baier H and Del Bene F (2013) Direction selectivity in the visual system of the zebrafish larva. Front Neural Circuits 7:111. doi: 10.3389/fncir.2013.00111.
  • Gendrel AV, Tang YA, Suzuki M, Godwin J, Nesterova TB, Greally JM, Heard E and Brockdorff N (2013) Epigenetic functions of smchd1 repress gene clusters on the inactive X chromosome and on autosomes. Mol Cell Biol. 33(16):3150-65. doi: 10.1128/MCB.00145-13.
  • Giorgetti L, Servant N and Heard E (2013) Changes in the organization of the genome during the mammalian cell cycle. Genome Biol. 14(12):142. doi: 10.1186/gb4147.
  • Guenatri M, Duffié R, Iranzo J, Fauque P and Bourc’his D (2013) Plasticity in Dnmt3L-dependent and -independent modes of de novo methylation in the developing mouse embryo. Development 140(3):562-72. doi: 10.1242/dev.089268.
  • Heard E and Moazed D (2013) Cell nucleus. Curr Opin Cell Biol. 25(3):279-80. doi: 10.1016/j.ceb.2013.05.002.
  • Heisenberg C-P and Bellaïche Y (2013) Forces in Tissue Morphogenesis and Patterning. Cell 153(5):948-62. doi: 10.1016/j.cell.2013.05.008.
  • Herszterg S, Leibfried A, Bosveld F, Martin C and Bellaiche Y (2013) Interplay between the dividing cell and its neighbors regulates adherens junction formation during cytokinesis in epithelial tissue. Dev Cell. 24(3):256-70. doi: 10.1016/j.devcel.2012.11.019.
  • Hozé N, Ruault M, Amoruso C, Taddei A and Holcman D (2013) Spatial telomere organization and clustering in yeast Saccharomyces cerevisiae nucleus is generated by a random dynamics of aggregation-dissociation. Mol Biol Cell. 24(11):1791-800, S1-10. doi: 10.1091/mbc.E13-01-0031.
  • Ishihara S, Sugimura K, Cox SJ, Bonnet I, Bellaïche Y and Graner F (2013) Comparative study of non-invasive force and stress inference methods in tissue. Eur Phys J E Soft Matter 36(4):9859. doi: 10.1140/epje/i2013-13045-8.
  • Jagut M, Mihaila-Bodart L, Molla-Herman A, Alin MF, Lepesant JA and Huynh J-R (2013) A mosaic genetic screen for genes involved in the early steps of Drosophila oogenesis. G3 (Bethesda) 3(3):409-25. doi: 10.1534/g3.112.004747.
  • Jauffred B, Llense F, Sommer B, Wang Z, Martin C and Bellaiche Y (2013) Regulation of centrosome movements by Numb and the Collapsin Response Mediator Protein during Drosophila sensory progenitor asymmetric division. Development 140(13):2657-68. doi: 10.1242/dev.087338.
  • Lafkas, D, Rodilla V, Huyghe M, Mourao L, Kiaris H and Fre S (2013) Notch3 marks clonogenic mammary luminal progenitor cells in vivo. J Cell Biol. 203(1):47-56. doi: 10.1083/jcb.201307046.
  • Lucas T, Ferraro T, Roelens B, De Las Heras Chanes J, Walczak AM, Coppey M and Dostatni N (2013) Live imaging of bicoid-dependent transcription in Drosophila embryos. Curr Biol. 23(21):2135-9. doi: 10.1016/j.cub.2013.08.053.
  • MacAlpine DM and Almouzni G (2013) Chromatin and DNA replication. Cold Spring Harb Perspect Biol. 5(8):a010207. doi: 10.1101/cshperspect.a010207.
  • Mathieu J, Cauvin C, Moch C, Radford SJ, Sampaio P, Perdigoto CN, Schweisguth F, Bardin AJ, Sunkel CE, McKim K, Echard A and Huynh J-R (2013) Aurora B and cyclin B have opposite effects on the timing of cytokinesis abscission in Drosophila germ cells and in vertebrate somatic cells. Dev Cell. 26(3):250-65. doi: 10.1016/j.devcel.2013.07.005.
  • Meister P and Taddei A (2013) Building silent compartments at the nuclear periphery: a recurrent theme. Curr Opin Genet Dev. 23(2):96-103. doi: 10.1016/j.gde.2012.12.001.
  • Müller S and Almouzni G (2013) A network of players in H3 histone variant deposition and maintenance at centromeres. Biochim Biophys Acta. 1839(3):241-50. doi: 10.1016/j.bbagrm.2013.11.008.
  • Nora EP, Dekker J and Heard E (2013) Segmental folding of chromosomes: A basis for structural and regulatory chromosomal neighborhoods. Bioessays 35(9):818-28. doi: 10.1002/bies.201300040.
  • Papamichos-Chronakis M and Peterson CL (2013) Chromatin and the genome integrity network. Nat Rev Genet. 14(1):62-75. doi: 10.1038/nrg3345.
  • Peterson CL and Almouzni G (2013) Nucleosome dynamics as modular systems that integrate DNA damage and repair. Cold Spring Harb Perspect Biol. 5(9). pii: a012658. doi: 10.1101/cshperspect.a012658.
  • Perdigoto C.N and Bardin A. J* (2013) Sending the right signal: Notch and stem cells. Biochim. Biophys. Acta 1830(2):2307-22. doi: 10.1016/j.bbagen.2012.08.009.
  • Pchelintsev NA, McBryan T, Rai TS, van Tuyn J, Ray-Gallet D, Almouzni G and Adams PD (2013) Placing the HIRA histone chaperone complex in the chromatin landscape. Cell Rep. 3(4):1012-9. doi: 10.1016/j.celrep.2013.03.026.
  • Pollex T, Piolot T and Heard E (2013) Live-cell imaging combined with immunofluorescence, RNA, or DNA FISH to study the nuclear dynamics and expression of the X-inactivation center. Methods Mol Biol. 1042:13-31. doi: 10.1007/978-1-62703-526-2_2.
  • Rolando M, Sanulli S, Rusniok C, Gomez-Valero L, Bertholet C, Sahr T, Margueron R, and Buchrieser C (2013) Legionella pneumophila Effector RomA Uniquely Modifies Host Chromatin to Repress Gene Expression and Promote Intracellular Bacterial Replication. Cell Host Microbe 13(4):395-405. doi: 10.1016/j.chom.2013.03.004.
  • Schulz EG and Heard E (2013) Role and control of X chromosome dosage in mammalian development. Curr Opin Genet Dev. 23(2):109-15. doi: 10.1016/j.gde.2013.01.008.
  • Sedwick C and Bellaiche Y (2013) Mastering multiscale morphology. J Cell Biol. 203(1):4-5. doi: 10.1083/jcb.2031pi.
  • Seitan VC, Faure AJ, Zhan Y, McCord RP, Lajoie BR, Ing-Simmons E, Lenhard B, Giorgetti L, Heard E, Fisher AG, Flicek P, Dekker J and Merkenschlager M (2013) Cohesin-based chromatin interactions enable regulated gene expression within pre-existing architectural compartments. Genome Res. 23(12):2066-77. doi: 10.1101/gr.161620.113.
  • Serrentino ME, Chaplais E, Sommermeyer V and Borde V (2013) Differential association of the conserved SUMO ligase Zip3 with meiotic double-strand break sites reveals regional variations in the outcome of meiotic recombination. PLoS Genet. 9(4):e1003416. doi: 10.1371/journal.pgen.1003416.
  • Sommermeyer V, Béneut C, Chaplais E, Serrentino ME and Borde V (2013) Spp1, a member of the Set1 Complex, promotes meiotic DSB formation in promoters by tethering histone H3K4 methylation sites to chromosome axes. Mol Cell. 49(1):43-54. doi: 10.1016/j.molcel.2012.11.008.
  • Soria G and Almouzni G (2013) Differential contribution of HP1 proteins to DNA end resection and homology-directed repair. Cell Cycle 12(3):422-9. doi: 10.4161/cc.23215.
  • Szenker E, Boyarchuk E and Almouzni G (2013) Properties and Functions of Histone Variants.  Fundamentals of Chromatin, Springer, pp 375-426. doi: 10.1007/978-1-4614-8624-4_10.
  • Tarabay Y, Kieffer E, Teletin M, Celebi C, Van Montfoort A, Zamudio N, Achour M, El Ramy R, Gazdag E, Tropel P, Mark M, Bourc’his D and Viville S (2013) The mammalian-specific Tex19.1 gene plays an essential role in spermatogenesis and placenta-supported development. Hum Reprod. 28(8):2201-14. doi: 10.1093/humrep/det129.
  • Tropberger P, Pott S, Keller C, Kamieniarz-Gdula K, Caron M, Richter F, Li G.H, Mittler G, Liu ET, Buhler M, Margueron R and Schneider R (2013) Regulation of Transcription through Acetylation of H3K122 on the Lateral Surface of the Histone Octamer. Cell 152(4):859-72. doi: 10.1016/j.cell.2013.01.032.

2012

  • Adam S and Polo SE (2012) Chromatin Dynamics during Nucleotide Excision Repair: Histones on the Move. Int J Mol Sci. 13(9):11895-911. doi: 10.3390/ijms130911895.
  • Allan RS, Zueva E, Cammas F, Schreiber HA, Masson V, Belz GT, Roche D, Maison C, Quivy JP, Almouzni G and Amigorena S (2012) An epigenetic silencing pathway controlling T helper 2 cell lineage commitment. Nature 487(7406):249-53. doi: 10.1038/nature11173.
  • Bosveld F, Bonnet I, Guirao B, Tlili S, Wang Z, Petitalot A, Marchand R, Bardet PL, Marcq P, Graner F and Bellaïche Y* (2012) Mechanical control of morphogenesis by Fat/Dachsous/Four-jointed planar cell polarity pathway. Science 336(6082):724-7. doi: 10.1126/science.1221071.
  • Bonnet I, Marcq P, Bosveld F, Fetler L, Bellaïche Y and Graner F (2012) Mechanical state, material properties and continuous description of an epithelial tissue. J R Soc Interface 9(75):2614-23. doi: 10.1098/rsif.2012.0263.
  • Cantaloube S, Romeo K, Le Baccon P, Almouzni G and Quivy JP (2012) Characterization of chromatin domains by 3D fluorescence microscopy: An automated methodology for quantitative analysis and nuclei screening. Bioessays 34(6):509-17. doi: 10.1002/bies.201100188.
  • Chen CJ, Servant N, Toedling J, Sarazin A, Marchais A, Duvernois-Berthet E, Cognat V, Colot V, Voinnet O, Heard E, Ciaudo C and Barillot E (2012) ncPRO-seq: a tool for annotation and profiling of ncRNAs in sRNA-seq data. Bioinformatics 28(23):3147-9. doi: 10.1093/bioinformatics/bts587.
  • Cornacchia D, Dileep V, Quivy JP, Foti R, Tili F, Santarella-Mellwig R, Antony C, Almouzni G, Gilbert DM and Buonomo SB (2012) Mouse Rif1 is a key regulator of the replication-timing programme in mammalian cells. EMBO J. 31(18):3678-90. doi: 10.1038/emboj.2012.214.
  • Gendrel AV, Apedaile A, Coker H, Termanis A, Zvetkova I, Godwin J, Tang YA, Huntley D, Montana G, Taylor S, Giannoulatou E, Heard E, Stancheva I and Brockdorff N (2012) Smchd1-dependent and -independent pathways determine developmental dynamics of CpG island methylation on the inactive X chromosome. Dev Cell. 23(2):265-79. doi: 10.1016/j.devcel.2012.06.011.
  • Jauffred B and Bellaïche Y (2012) Analysis Frizzled signaling using fixed and live imaging of the asymmetric cell division of the Drosophila sensory organ precursor cell. Methods Mol. Biol. 839:19- 25. doi: 10.1007/978-1-61779-510-7_2.
  • Jullien J, Astrand C, Szenker E, Garrett N, Almouzni G and Gurdon JB (2012) HIRA dependent H3.3 deposition is required for transcriptional reprogramming following nuclear transfer to Xenopus oocytes. Epigenetics Chromatin. 5(1):17. doi: 10.1186/1756-8935-5-17.
  • Nora E.P, Lajoie B, Schulz E.G, Giorgetti L, Okamoto I, Servant N, Piolot T, van Berkum N.L, Meisig J, Sedat J, Barillot E, Blüthgen N, Dekker J* and Heard E* (2012) Spatial partitioning of the regulatory landscape of the X-inactivation center. Nature 485(7398):381-5. doi: 10.1038/nature11049.
  • Pollex T, Heard E (2012) Recent advances in X-chromosome inactivation research. Curr Opin Cell Biol. 24(6):825-32. doi: 10.1016/j.ceb.2012.10.007.
  • Proudhon C, Duffié R, Ajjan S, Cowley M, Iranzo J, Carbajosa G, Saadeh H, Holland ML, Oakey RJ, Rakyan VK, Schulz R and Bourc’his D (2012) Protection against de novo methylation is instrumental in maintaining parent-of-origin methylation inherited from the gametes. Mol Cell. 47(6):909-20. doi: 10.1016/j.molcel.2012.07.010.
  • Servant N, Lajoie BR, Nora EP, Giorgetti L, Chen CJ, Heard E, Dekker J and Barillot E (2012) HiTC: exploration of high-throughput ‘C’ experiments. Bioinformatics 28(21):2843-4. doi: 10.1093/bioinformatics/bts521.
  • Soria G, Polo SE and Almouzni G (2012) Prime, repair, restore: the active role of chromatin in the DNA damage response. Mol Cell. 46(6):722-34. doi: 10.1016/j.molcel.2012.06.002.
  • Szenker E, Lacoste N and Almouzni G (2012) A developmental requirement for HIRA-dependent H3.3 deposition revealed at gastrulation in Xenopus. Cell Rep. 1(6):730-40. doi: 10.1016/j.celrep.2012.05.006.
  • Taddei A and Gasser SM (2012) Structure and function in the budding yeast nucleus. Genetics 192(1):107-29. doi: 10.1534/genetics.112.140608.
  • Talbert PB, Ahmad K, Almouzni G, Ausió J, Berger F, Bhalla PL, Bonner WM, Cande WZ, Chadwick BP, Chan SW, Cross GA, Cui L, Dimitrov SI, Doenecke D, Eirin-López JM, Gorovsky MA, Hake SB, Hamkalo BA, Holec S, Jacobsen SE, Kamieniarz K, Khochbin S, Ladurner AG, Landsman D, Latham JA, Loppin B, Malik HS, Marzluff WF, Pehrson JR, Postberg J, Schneider R, Singh MB, Smith MM, Thompson E, Torres-Padilla ME, Tremethick DJ, Turner BM, Waterborg JH, Wollmann H, Yelagandula R, Zhu B and Henikoff S (2012) A unified phylogeny-based nomenclature for histone variants. Epigenetics Chromatin 5:7. doi: 10.1186/1756-8935-5-7.
  • Zueva E, Allan RS, Cammas F, Schreiber HA, Masson V, Belz GT, Roche D, Maison C, Quivy JP, Almouzni G and Amigorena S (2012) Epigenetic control of Th2 helper cell differentiation by the Suv39h1/HP1α pathway. Med Sci. 28(12):1032-4. doi: 10.1051/medsci/20122812003.